ARACNE download and setup aracne –i /data/input.exp –k 0.15 –t 0.05–r 1 http://wiki.c2b2.columbia.edu/califanolab/index.php/Software/ARACNE aracne2 –i /data/input.exp –k 0.15 –t 0.05 –r 1 –p 1e-7 Outputs an adjacency matrix that consists of inferred interactions.
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